AMPHORA2
CARMA3 / WebCarma
ClaMS
DiScRIBinATE
FCP / RITA
MEGAN5
MetaPhlAn
MetaPhyler
Metaxa2
MLTreeMap
mothur
mOTUs
NBC
PhyloPythia
Phylosift
PhylOTU
PhymmBL
QIIME
RAIphy
rMLST
specI
TaxSOM
Topiary Explorer